Hi
I'm entirely unfamiliar with its use, but my academic adviser brought it up to me about the use of Bayesian inference in phylogeny.
Does anyone know some good references I could refer to in order to become more familiar with it?
As a start, you might try:
Felsenstein, J. 2004. Inferring Phylogenies. Sinauer. Sunderrland, MA.
or
Michael Balsai, Ph.D. Instructor in Biology Department of Biology Temple University