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Segnosaurs Analyzed as Basal Theropods



Ken Kinman suggested that I analyze segnosaurs as basal theropods.  He believes that segnosaurs may be polyphyletic if they are compared to a range of tetanurines without using synapomorphies for Coelurosauria and more exclusive clades.  I will do this utilizing Rauhut's (2000) analysis of theropods, which focuses on non-coelurosaurs.  The details of this analysis can be seen in my previous post, and a copy of the thesis is available to those of you who contact me offlist.  Therizinosauroidea is an OTU in the analysis and is the sister group of Oviraptorosauria, as in other recent analyses (Makovicky and Sues 1998, Holtz 2000, mine unpublished).  First, I coded Beipiaosaurus, Alxasaurus, Therizinosaurus and "segnosaurids" as separate OTU's and entered them into the matrix instead of Therizinosauroidea.  Remember that no segnosaur synapomorphies were used, as they were pointless in the original analysis.  This results in 16632 trees of 676 steps (24 more than the original run).  The tree is identical to the original, except within Maniraptora, where the topology is now-
      
                  |_____________Beipiaosaurus
                  |               |____Alxasaurus
                  |                  |___Therizinosaurus
                  |                  |___"Segnosauridae"
                  |______________Caudipteryx
                  |               |_____Microvenator
                  |                   |___Caenagnathoidea (Oviraptorosauria is used)
                  |                   |___Avimimus
                  |______________Troodontidae
                     |      |         |___Dromaeosauridae (including Sinornithosaurus)
                     |      |_________Unenlagia
                     |              |_____Aves (including Rahonavis)
                     |______________Bagaraatan
 
Note the two changes- the segnosaur-oviraptorosaur clade is not present in some trees, and Bagaraatan is resolved as a basal paravian (as in my analysis).  Of course, a segnosaur-oviraptorosaur clade is present in some trees, so such a result requires 0 more steps.  This result is important, as it shows segnosaurs group together even without synapomorphies of the group included.  Also, Beipiaosaurus is the most basal member, as would be expected.
Next, I removed all coelurosaurian, tyrannoraptoran, maniraptoriform, maniraptoran and segnosaur-oviraptorosaur characters from the analysis (as well as those characters supporting intermediate, but unnamed clades).  This is easily done, as Rauhut includes a list of all characters that diagnose each taxon.  I excluded those characters found with DELTRAN, which supports parallels over reversals.  This excluded 66 characters, leaving only 158.  A potential problem with doing this is that certain coelurosaurian clades may be diagnosed by ordered multistate characters.  For example, Maniraptora may be characterized by state 2 of character 50, and Tetanurae may be characterized by state 1 (which includes state 2).  By excluding character 50, both support for Maniraptora and Tetanurae is lost.  This could be solved by making multistate ordered characters multiple characters, one for each state, then excluding the ones with coelurosaurian states.  Such a process is time consuming however, so I did not try it.  Another problem is that some characters characterizing coelurosaurian clades may also characterize more basal clades in parallel.  Thus, excluding these characters may lower support for more basal clades as well.  Keeping these problems in mind, a huge number of MPT's were generated (>55000).  These are 434 steps long and very unresolved, as might be expected if every character supporting Coelurosauria and higher clades was removed. 
 
_____Euparkeria
|_____Marasuchus
|_____Ornithischia
|_____Sauropodomorpha
|_____Eoraptor
|_____Staurkiosaurus
  |     |_Herrerasaurus
  |______Shuvosaurus
  |________Liliensternus liliensterni
  |         |  |_Liliensternus airelensis
  |          |_Gojirasaurus
  |          |__Segisaurus
  |           |_Syntarsus
  |           |_Coelophysis
  |________Dilophosaurus
  |___________Ceratosaurus
        |           |__Elaphrosaurus
        |             |_Abelisauridae (including Noasaurus)
        |_________Piatnitzkysaurus
        |_________"Szechuanosaurus" zigongensis
        |__________Magnosaurus (including Eustreptospondylus)
        |  |  |_______Monolophosaurus
        |  |  |_______Poekilopleuron
        |  |  |_______Torvosaurus
        |  |  |     |____Chilantaisaurus
        |  |  |     |____Spinosauridae (Baryonychidae is used)
        |  |  |_______Afrovenator
        |  |  |_______Allosaurus
        |  |  |_______Sinraptoridae
        |  |  |_______Neovenator
        |  |  |_______Carcharodontosauridae (including Acrocanthosaurus)
        |  |_________Deltadromeus
        |     |________Stokesosaurus
        |            |____Tyrannosauridae
        |____________Proceratosaurus
        |____________Coelurus
        |____________Sinosauropteryx
        |                |___Compsognathus
        |                  |__Santana compsognathid
        |_____________Ornitholestes
        |_____________Ornithomimosauria
        |_____________Bagaraatan
        |_____________Beipiaosaurus
        |_____________Alxasaurus
        |             |_____Therizinosaurus
        |             |_____"Segnosauridae"
        |_____________Caudipteryx
        |_____________Microvenator
        |_____________Caenagnathoidea (Oviraptorosauria is used)
        |_____________Avimimus
        |_____________Troodontidae
        |_____________Dromaeosauridae (including Sinornithosaurus)
        |_____________Unenlagia
        |_____________Aves (including Rahonavis)
 
Note that although Beipiaosaurus is in the tetanurine polytomy, Therizinosauroidea is one of the few clades remaining.  Not even oviraptorosaur or eumaniraptoran clades remain, which is unexpected, as I did not exclude their characters.  This is very good evidence for therizinosauroid monophyly.  I examined several random trees (numbers 1, 10000, 20000, 30000, 40000 and 50000) and noticed the phylogeny around segnosaurs was the same (sister group of oviraptorosaurs) and Beipiaosaurus grouped with therizinosauroids, but Proceratosaurus was jumping around to various positions in the tree.  As the taxon is only known from a partial skull, it no doubt had even fewer codable characters now and could not be placed precisely.  This also explains why Oviraptorosauria and Eumaniraptora were not found- Proceratosaurus was a member of those clades in some trees.  Thus, I deleted it and ran the analysis again.  Yet again, many trees were generated (>32000; 434 steps long) and there was a large polytomy.  Note that because the number of steps in these trees is the same as the previous analysis, Proceratosaurus was adding no information and did not affect tree topology.  This time however, the consensus tree was as follows-
 
_____Euparkeria
|_____Marasuchus
|_____Ornithischia
|_____Sauropodomorpha
|_____Eoraptor
 |_____Staurkiosaurus
  |     |_Herrerasaurus
  |______Shuvosaurus
  |________Liliensternus liliensterni
  |     |   |  |_Liliensternus airelensis
  |     |    |_Gojirasaurus
  |     |    |__Segisaurus
  |     |     |_Syntarsus
  |     |     |_Coelophysis
  |     |______Dilophosaurus
  |___________Ceratosaurus
        |           |__Elaphrosaurus
        |             |_Abelisauridae (including Noasaurus)
        |__________Piatnitzkysaurus
        |__________"Szechuanosaurus" zigongensis
        |__________Magnosaurus (including Eustreptospondylus)
        |___________Monolophosaurus
        |___________Poekilopleuron
        |___________Torvosaurus
        |___________Chilantaisaurus
        |___________Spinosauridae (Baryonychidae is used)
        |___________Afrovenator
        |___________Allosaurus
        |___________Sinraptoridae
        |___________Neovenator
        |___________Carcharodontosauridae (including Acrocanthosaurus)
        |___________Deltadromeus
        |     |________Stokesosaurus
        |            |____Tyrannosauridae
        |____________Coelurus
        |____________Sinosauropteryx
        |_____________Compsognathus
        |_____________Santana compsognathid
        |_____________Ornitholestes
        |_____________Ornithomimosauria
        |_____________Bagaraatan
        |_____________Alxasaurus
        |      |   |  |_____Therizinosaurus
        |      |   |  |_____"Segnosauridae"
        |      |   |_______Beipiaosaurus
        |      |_________Caudipteryx
        |             |_____Microvenator
        |             |_____Caenagnathoidea (Oviraptorosauria is used)
        |             |_____Avimimus
        |_____________Troodontidae
               |_________Dromaeosauridae (including Sinornithosaurus)
               |_________Unenlagia
                      |_____Aves (including Rahonavis)
 
So even without coelurosaur, maniraptoriform, maniraptoran, segnosaur-oviraptorosaur, segnosaur or therizinosauroid characters, segnosaurs are monophyletic and the sister group of oviraptorosaurs.  Additionally, Beipiaosaurus is the most basal taxon, as is expected.  There is no tendancy for segnosaurs to be para- or polyphyletic and no indication they clade with any non-maniraptoran taxa.  This is in opposition to Ken's hypothesis and suggests that the current consensus of paleontologists, that segnosaurs are monophyletic and sister group to oviraptorosaurs, is correct.  If Ken would like me to try another experiment, he is welcome to suggest one.
 
Mickey Mortimer